Across TCGA pan-cancer cohorts, LINC01790 RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of LINC01790’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where LINC01790 RNA is repressed in tumor relative to normal tissue. In most cancer types LINC01790 is over-expressed in tumor, although a few such as HNSC show the opposite, repressed pattern.

HNSC and KIRC are the cancer types where LINC01790 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC01790 RNA (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
HNSC	All	All	−0.033	.004	6	view →
KIRC	All	All	+0.001	.044	1	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 2 strongest of 2 lineages.

Exploration

Same gene, other analysis: LINC01790 RNA expression & survival · all LINC01790 data types