Across TCGA patient cohorts, LINC01778 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,421 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01778-associated proteins across cancer lineages are PTPN1, JUNB, and ABAT. Each is linked with LINC01778 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01778-to-partner and partner-to-LINC01778 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01778→partner) and Y-score (partner→LINC01778) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PTPN1 →	-0.321	-0.281	.002	.005	3	4
COAD	JUNB →	-0.395	-0.223	<.001	<.001	3	4
BRCA	ABAT →	+0.838	+0.387	<.001	<.001	3	4
GBM	PRKCD →	-0.315	-0.445	<.001	.002	3	3
GBM	PTPN1_S378 →	-1.080	-0.637	<.001	<.001	3	3
GBM	PTPRC_S975 →	-0.514	-0.405	<.001	.003	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,421 associations by consensus.

Exploration

LINC01778 survival (RNA) · tumor vs normal (RNA) · all LINC01778 data types