LINC01743

Across TCGA patient cohorts, LINC01743 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,869 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01743-associated GO terms across cancer lineages are Positive regulation of DNA repair, Regulation of DNA repair, and Positive regulation of DNA metabolic process. Each is linked with LINC01743 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC01743-to-partner and partner-to-LINC01743 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA repair grouped by LINC01743-low versus LINC01743-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01743→partner) and Y-score (partner→LINC01743) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA repair →	+0.047	+0.030	<.001	<.001	3	17
STAD	Regulation of DNA repair →	+0.049	+0.028	<.001	<.001	3	15
STAD	Positive regulation of DNA metabolic process →	+0.049	+0.028	<.001	<.001	3	15
STAD	Positive regulation of chromosome organization →	+0.054	+0.031	<.001	<.001	3	13
STAD	Regulation of DNA replication →	+0.058	+0.042	<.001	<.001	3	13
STAD	Obsolete histone modification →	+0.045	+0.022	<.001	.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,869 associations by consensus.

Positive regulation of DNA repair by LINC01743 expression — STAD

Explore this box plot interactively →