LINC01717

Across TCGA patient cohorts, LINC01717 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,064 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01717-associated proteins across cancer lineages are CSDE1_S514, CARMIL2_S1381, and MANF. Each is linked with LINC01717 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC01717-to-partner and partner-to-LINC01717 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01717 versus CSDE1_S514 in HNSC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01717→partner) and Y-score (partner→LINC01717) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CSDE1_S514 →	+0.809	+0.426	<.001	<.001	3	6
LSCC	CARMIL2_S1381 →	+0.894	+0.416	<.001	<.001	3	5
LSCC	MANF →	+0.566	+0.474	<.001	<.001	3	5
LSCC	DOCK2 →	+0.512	+0.348	<.001	<.001	3	4
CCRCC	NCKAP1L →	+0.548	+0.554	<.001	<.001	3	4
LSCC	ADA2 →	+0.510	+0.350	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,064 associations by consensus.

LINC01717 vs CSDE1_S514 — HNSC

Explore this scatter interactively →