LINC01712

Across TCGA patient cohorts, LINC01712 mutation is significantly associated with the RNA expression of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01712-associated genes across cancer lineages are TDGF1P2, RNU6-1318P, and RNU6-147P. Each is linked with LINC01712 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01712-to-partner and partner-to-LINC01712 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TDGF1P2 grouped by LINC01712-low versus LINC01712-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01712→partner) and Y-score (partner→LINC01712) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	TDGF1P2 →	+0.156	+3.488	<.001	.008	3	1
UCEC	RNU6-1318P →	+0.544	+4.358	<.001	.001	3	1
UCEC	RNU6-147P →	+0.462	+4.551	<.001	.001	3	1
UCEC	TRGJP2 →	+1.055	+3.888	<.001	.002	3	1
UCEC	RNU1-101P →	+0.381	+4.226	<.001	.008	3	1
UCEC	VN1R37P →	+0.177	+4.226	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

TDGF1P2 by LINC01712 expression — UCEC

Explore this box plot interactively →