LINC01701

Across TCGA patient cohorts, LINC01701 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,074 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01701-associated GO terms across cancer lineages are tRNA processing, Respiratory chain complex IV assembly, and Organelle fusion. Each is linked with LINC01701 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01701-to-partner and partner-to-LINC01701 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA processing grouped by LINC01701-low versus LINC01701-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01701→partner) and Y-score (partner→LINC01701) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	tRNA processing →	+0.059	+0.179	<.001	<.001	2	11
STAD	Respiratory chain complex IV assembly →	+0.053	+0.112	<.001	<.001	3	10
STAD	Organelle fusion →	+0.050	+0.143	<.001	.001	2	11
STAD	Protein localization to nuclear body →	+0.063	+0.163	<.001	.001	2	10
STAD	Protein localization to nucleoplasm →	+0.065	+0.190	<.001	<.001	2	10
STAD	Positive regulation of chromosome organization →	+0.064	+0.193	<.001	<.001	2	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,074 associations by consensus.

tRNA processing by LINC01701 expression — STAD

Explore this box plot interactively →