LINC01675

Across TCGA patient cohorts, LINC01675 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,950 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible LINC01675-associated GO terms across cancer lineages are Antigen processing and presentation of exogenous peptide antigen, Cytoplasmic pattern recognition receptor signaling pathway, and Negative regulation of innate immune response. Each is linked with LINC01675 in more than 23 cancer types. Because this analysis shows association rather than direction, both LINC01675-to-partner and partner-to-LINC01675 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Antigen processing and presentation of exogenous peptide antigen grouped by LINC01675-low versus LINC01675-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01675→partner) and Y-score (partner→LINC01675) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Antigen processing and presentation of exogenous peptide antigen →	+0.110	+0.244	<.001	<.001	3	24
STAD	Cytoplasmic pattern recognition receptor signaling pathway →	+0.054	+0.170	<.001	<.001	3	24
STAD	Negative regulation of innate immune response →	+0.057	+0.194	<.001	<.001	3	24
SKCM	Positive regulation of pyroptosis →	+0.122	+0.211	<.001	<.001	3	23
UCS	Negative regulation of viral process →	+0.056	+0.238	<.001	.002	3	23
ESCA	Antigen processing and presentation of exogenous antigen →	+0.098	+0.263	<.001	<.001	2	24

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,950 associations by consensus.

Antigen processing and presentation of exogenous peptide antigen by LINC01675 expression — ESCA

Explore this box plot interactively →