LINC01664

Across TCGA patient cohorts, LINC01664 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,138 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01664-associated proteins across cancer lineages are STXBP1, FLNA_S1459, and RAB12. Each is linked with LINC01664 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC01664-to-partner and partner-to-LINC01664 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01664 versus STXBP1 in GBM, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01664→partner) and Y-score (partner→LINC01664) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	STXBP1 →	+0.621	+0.283	<.001	<.001	3	3
BRCA	FLNA_S1459 →	-0.381	-0.231	.005	.003	3	3
LSCC	RAB12 →	+0.319	+0.154	<.001	<.001	3	2
GBM	MTMR1 →	+0.166	+0.274	.006	.002	3	2
GBM	RPL3 →	-0.252	-0.188	<.001	.008	3	2
GBM	S100A8 →	-1.015	-0.228	.004	.002	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,138 associations by consensus.

LINC01664 vs STXBP1 — GBM

Explore this scatter interactively →