LINC01656

Across TCGA patient cohorts, LINC01656 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,509 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01656-associated GO terms across cancer lineages are Endosomal transport, Negative regulation of cellular catabolic process, and Retrograde transport, endosome to Golgi. Each is linked with LINC01656 in more than 20 cancer types. Because this analysis shows association rather than direction, both LINC01656-to-partner and partner-to-LINC01656 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosomal transport grouped by LINC01656-low versus LINC01656-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01656→partner) and Y-score (partner→LINC01656) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Endosomal transport →	+0.066	+0.078	<.001	<.001	3	21
STAD	Negative regulation of cellular catabolic process →	+0.063	+0.077	<.001	<.001	3	21
STAD	Retrograde transport, endosome to Golgi →	+0.062	+0.071	<.001	<.001	3	21
STAD	Peptidyl-lysine modification →	+0.068	+0.090	<.001	<.001	3	21
STAD	Glycerophospholipid biosynthetic process →	+0.059	+0.085	<.001	<.001	3	21
STAD	Glycerophospholipid metabolic process →	+0.057	+0.088	<.001	<.001	3	21

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,509 associations by consensus.

Endosomal transport by LINC01656 expression — STAD

Explore this box plot interactively →