LINC01650

Across TCGA patient cohorts, LINC01650 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,124 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01650-associated GO terms across cancer lineages are Establishment of protein localization to membrane, Carbohydrate homeostasis, and Negative regulation of kinase activity. Each is linked with LINC01650 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01650-to-partner and partner-to-LINC01650 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of protein localization to membrane grouped by LINC01650-low versus LINC01650-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01650→partner) and Y-score (partner→LINC01650) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Establishment of protein localization to membrane →	+0.141	+0.081	<.001	<.001	3	5
STAD	Carbohydrate homeostasis →	+0.094	+0.084	<.001	<.001	3	5
STAD	Negative regulation of kinase activity →	+0.126	+0.048	<.001	<.001	3	5
STAD	Cellular pigmentation →	+0.102	+0.072	<.001	.001	3	5
STAD	rRNA metabolic process →	+0.153	+0.041	<.001	<.001	3	5
STAD	Vesicle localization →	+0.110	+0.062	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,124 associations by consensus.

Establishment of protein localization to membrane by LINC01650 expression — STAD

Explore this box plot interactively →