LINC01629

Across TCGA patient cohorts, LINC01629 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,113 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01629-associated GO terms across cancer lineages are Endoderm formation, Placenta development, and Regulation of protein localization to nucleus. Each is linked with LINC01629 in more than 18 cancer types. Because this analysis shows association rather than direction, both LINC01629-to-partner and partner-to-LINC01629 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endoderm formation grouped by LINC01629-low versus LINC01629-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01629→partner) and Y-score (partner→LINC01629) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Endoderm formation →	+0.062	+0.210	<.001	<.001	3	19
ESCA	Placenta development →	+0.055	+0.731	<.001	.004	2	19
STAD	Regulation of protein localization to nucleus →	+0.062	+0.261	<.001	<.001	3	18
STAD	Response to epidermal growth factor →	+0.066	+0.314	<.001	<.001	3	18
ESCA	Cellular response to interleukin-1 →	+0.059	+1.233	<.001	<.001	3	17
STAD	Organelle disassembly →	+0.057	+0.237	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,113 associations by consensus.

Endoderm formation by LINC01629 expression — STAD

Explore this box plot interactively →