LINC01620

Across TCGA patient cohorts, LINC01620 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,676 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01620-associated GO terms across cancer lineages are Positive regulation of DNA repair, Import into nucleus, and Mitochondrial gene expression. Each is linked with LINC01620 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC01620-to-partner and partner-to-LINC01620 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA repair grouped by LINC01620-low versus LINC01620-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01620→partner) and Y-score (partner→LINC01620) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA repair →	+0.062	+0.114	<.001	<.001	3	17
STAD	Import into nucleus →	+0.064	+0.117	<.001	<.001	3	16
STAD	Mitochondrial gene expression →	+0.074	+0.114	<.001	<.001	3	16
STAD	RNA polymerase II preinitiation complex assembly →	+0.068	+0.126	<.001	<.001	3	15
STAD	Regulation of DNA strand elongation →	+0.058	+0.085	<.001	<.001	3	15
ESCA	Organelle disassembly →	+0.068	+0.118	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,676 associations by consensus.

Positive regulation of DNA repair by LINC01620 expression — STAD

Explore this box plot interactively →