LINC01609

Across TCGA patient cohorts, LINC01609 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,867 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01609-associated GO terms across cancer lineages are Regulation of mRNA catabolic process, Telomerase RNA localization, and Mitochondrial gene expression. Each is linked with LINC01609 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC01609-to-partner and partner-to-LINC01609 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of mRNA catabolic process grouped by LINC01609-low versus LINC01609-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01609→partner) and Y-score (partner→LINC01609) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of mRNA catabolic process →	+0.087	+0.055	<.001	<.001	3	7
STAD	Telomerase RNA localization →	+0.111	+0.041	<.001	<.001	3	7
STAD	Mitochondrial gene expression →	+0.121	+0.055	<.001	<.001	3	7
STAD	Regulation of telomere maintenance via telomere lengthening →	+0.100	+0.045	<.001	<.001	3	7
STAD	Negative regulation of DNA metabolic process →	+0.085	+0.043	<.001	<.001	3	7
STAD	Transcription by RNA polymerase I →	+0.116	+0.052	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,867 associations by consensus.

Regulation of mRNA catabolic process by LINC01609 expression — STAD

Explore this box plot interactively →