LINC01606

Across TCGA patient cohorts, LINC01606 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,799 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC01606-associated GO terms across cancer lineages are Cytokinesis, mRNA 3'-end processing, and Macromolecule methylation. Each is linked with LINC01606 in more than 18 cancer types. Because this analysis shows association rather than direction, both LINC01606-to-partner and partner-to-LINC01606 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cytokinesis grouped by LINC01606-low versus LINC01606-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01606→partner) and Y-score (partner→LINC01606) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Cytokinesis →	+0.078	+0.259	<.001	<.001	3	18
ESCA	mRNA 3'-end processing →	+0.057	+0.286	<.001	<.001	2	19
ESCA	Macromolecule methylation →	+0.055	+0.362	<.001	.001	2	18
ESCA	Mitochondrial respiratory chain complex assembly →	+0.061	+0.347	<.001	<.001	3	17
STAD	Methylation →	+0.043	+0.188	<.001	<.001	3	17
ESCA	Regulation of mitochondrial translation →	+0.061	+0.426	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,799 associations by consensus.

Cytokinesis by LINC01606 expression — STAD

Explore this box plot interactively →