LINC01600

Across TCGA patient cohorts, LINC01600 mutation is significantly associated with the total protein of many other genes, with 20 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01600-associated genes across cancer lineages are GAPDH, ATM, and Caspase-8. Each is linked with LINC01600 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01600-to-partner and partner-to-LINC01600 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GAPDH grouped by LINC01600-low versus LINC01600-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01600→partner) and Y-score (partner→LINC01600) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	GAPDH →	+0.451	+3.169	.047	.018	3	2
UCEC	ATM →	-0.473	-1.700	.014	.044	3	2
UCEC	Caspase-8 →	-0.264	-3.432	.013	.005	3	2
UCEC	eEF2 →	+0.416	+3.169	.006	.018	3	1
UCEC	HER2_pY1248 →	-0.239	-4.000	.035	<.001	3	1
UCEC	IGFBP2 →	-0.659	-2.999	.016	.035	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

GAPDH by LINC01600 expression — UCEC

Explore this box plot interactively →