Across TCGA patient cohorts, LINC01560 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,281 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01560-associated proteins across cancer lineages are STAG2, CSTA, and ING4. Each is linked with LINC01560 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC01560-to-partner and partner-to-LINC01560 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01560→partner) and Y-score (partner→LINC01560) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	STAG2 →	+0.297	+0.570	<.001	<.001	3	6
BRCA	CSTA →	-1.083	-0.393	<.001	<.001	3	6
BRCA	ING4 →	+0.404	+0.405	<.001	<.001	3	6
HNSC	ZMYM2 →	+0.327	+0.756	<.001	<.001	3	6
HNSC	ZNF768 →	+0.768	+0.906	.001	.002	3	6
GBM	RBM39 →	+0.202	+0.520	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,281 associations by consensus.

Exploration

LINC01560 survival (RNA) · tumor vs normal (RNA) · all LINC01560 data types