LINC01559

Across TCGA patient cohorts, LINC01559 mutation is significantly associated with the immune_cell of many other genes, with 3 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC01559-associated genes across cancer lineages are CD8+ naive T-cells, NK cells, and Fibroblasts. Each is linked with LINC01559 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01559-to-partner and partner-to-LINC01559 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD8+ naive T-cells grouped by LINC01559-low versus LINC01559-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01559→partner) and Y-score (partner→LINC01559) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	CD8+ naive T-cells →	-0.040	-3.160	.013	.019	3	1
STAD	NK cells →	+0.011	+5.597	<.001	.040	3	1
HNSC	Fibroblasts →	+0.054	+5.339	<.001	.047	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

CD8+ naive T-cells by LINC01559 expression — SKCM

Explore this box plot interactively →