LINC01558

Across TCGA patient cohorts, LINC01558 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,056 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LINC01558-associated proteins across cancer lineages are AFDN, ADPRH, and SEC23B. Each is linked with LINC01558 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01558-to-partner and partner-to-LINC01558 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01558 versus AFDN in OV, with a Pearson correlation of 0.50.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01558→partner) and Y-score (partner→LINC01558) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	AFDN →	+0.462	+1.380	<.001	<.001	3	5
UCEC	ADPRH →	+0.352	+0.462	<.001	.005	3	4
BRCA	SEC23B →	-0.297	-0.477	.001	.001	3	4
OV	ZSWIM8_S53 →	-0.841	-0.996	.001	.008	3	3
BRCA	SRP68 →	-0.265	-0.391	<.001	.003	3	3
COAD	TIMM21 →	-0.344	-1.281	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,056 associations by consensus.

LINC01558 vs AFDN — OV

Explore this scatter interactively →