LINC01554

Across TCGA patient cohorts, LINC01554 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,139 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01554-associated GO terms across cancer lineages are Cotranslational protein targeting to membrane, Proton motive force-driven ATP synthesis, and Regulation of calcium ion export across plasma membrane. Each is linked with LINC01554 in more than 20 cancer types. Because this analysis shows association rather than direction, both LINC01554-to-partner and partner-to-LINC01554 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cotranslational protein targeting to membrane grouped by LINC01554-low versus LINC01554-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01554→partner) and Y-score (partner→LINC01554) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Cotranslational protein targeting to membrane →	+0.065	+0.128	<.001	<.001	3	21
STAD	Proton motive force-driven ATP synthesis →	+0.063	+0.099	<.001	<.001	3	18
STAD	Regulation of calcium ion export across plasma membrane →	+0.050	+0.144	<.001	<.001	3	18
STAD	Cellular response to toxic substance →	+0.045	+0.123	<.001	<.001	3	17
STAD	SRP-dependent cotranslational protein targeting to membrane →	+0.057	+0.106	<.001	<.001	3	17
STAD	Nucleoside triphosphate metabolic process →	+0.058	+0.144	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,139 associations by consensus.

Cotranslational protein targeting to membrane by LINC01554 expression — STAD

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