LINC01554

Across TCGA patient cohorts, LINC01554 mutation is significantly associated with the RNA expression of many other genes, with 30 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01554-associated genes across cancer lineages are OR51C1P, MIR425, and RN7SKP44. Each is linked with LINC01554 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01554-to-partner and partner-to-LINC01554 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR51C1P grouped by LINC01554-low versus LINC01554-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01554→partner) and Y-score (partner→LINC01554) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	OR51C1P →	+0.136	+6.005	<.001	<.001	3	1
UCEC	MIR425 →	+0.954	+4.499	<.001	.005	3	1
UCEC	RN7SKP44 →	+0.260	+4.551	<.001	.009	3	1
UCEC	RNU1-7P →	+0.377	+4.771	<.001	.006	3	1
UCEC	MIR619 →	+0.913	+4.374	<.001	.007	3	1
UCEC	RNU6-192P →	+0.539	+4.852	<.001	.006	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 30 associations by consensus.

OR51C1P by LINC01554 expression — UCEC

Explore this box plot interactively →