LINC01549

Across TCGA patient cohorts, LINC01549 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,964 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01549-associated proteins across cancer lineages are SLC5A6, ANLN, and AP3B1. Each is linked with LINC01549 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC01549-to-partner and partner-to-LINC01549 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01549 versus SLC5A6 in COAD, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01549→partner) and Y-score (partner→LINC01549) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	SLC5A6 →	+0.842	+0.393	<.001	<.001	3	3
BRCA	ANLN →	+0.527	+0.125	<.001	.004	3	3
GBM	AP3B1 →	-0.178	-0.406	<.001	.001	3	3
GBM	MYO5C →	-0.723	-0.588	<.001	<.001	3	3
COAD	NAXE →	+0.384	+0.500	<.001	.002	3	3
GBM	HEXIM1 →	-0.309	-0.639	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,964 associations by consensus.

LINC01549 vs SLC5A6 — COAD

Explore this scatter interactively →