LINC01549

Across TCGA patient cohorts, LINC01549 mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC01549-associated genes across cancer lineages are RN7SKP135. Each is linked with LINC01549 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01549-to-partner and partner-to-LINC01549 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SKP135 grouped by LINC01549-low versus LINC01549-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01549→partner) and Y-score (partner→LINC01549) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RN7SKP135 →	+0.173	+8.066	<.001	.007	3	1

Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

RN7SKP135 by LINC01549 expression — UCEC

Explore this box plot interactively →