Across TCGA cell cohorts, LINC01547 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible LINC01547-associated genes across cancer lineages are FCN2, MAGEB3, and IQCF6. Each is linked with LINC01547 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01547-to-partner and partner-to-LINC01547 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01547→partner) and Y-score (partner→LINC01547) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	FCN2 →	+0.039	+4.415	<.001	.007	3	1
LARGE_INTESTINE	MAGEB3 →	+0.055	+4.467	<.001	.004	3	1
LARGE_INTESTINE	IQCF6 →	+0.322	+4.467	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Exploration

LINC01547 survival (RNA) · tumor vs normal (RNA) · all LINC01547 data types