LINC01544

Across TCGA patient cohorts, LINC01544 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,204 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LINC01544-associated proteins across cancer lineages are NBL1, TGFB1I1, and UAP1. Each is linked with LINC01544 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01544-to-partner and partner-to-LINC01544 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01544 versus NBL1 in GBM, with a Pearson correlation of 0.27.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01544→partner) and Y-score (partner→LINC01544) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	NBL1 →	+0.814	+0.096	<.001	<.001	3	4
CCRCC	TGFB1I1 →	+0.491	+0.262	.001	.001	3	4
CCRCC	UAP1 →	-0.385	-0.308	.001	.001	3	4
PDAC	FERMT2 →	+0.385	+0.172	<.001	<.001	3	4
PDAC	UACA →	+0.287	+0.120	<.001	.004	3	3
PDAC	UNC5B →	+0.563	+0.134	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,204 associations by consensus.

LINC01544 vs NBL1 — GBM

Explore this scatter interactively →