LINC01544

Across TCGA patient cohorts, LINC01544 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,332 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01544-associated GO terms across cancer lineages are Sex differentiation, Positive regulation of Wnt signaling pathway, and Negative regulation of neuron projection development. Each is linked with LINC01544 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC01544-to-partner and partner-to-LINC01544 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Sex differentiation grouped by LINC01544-low versus LINC01544-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01544→partner) and Y-score (partner→LINC01544) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Sex differentiation →	+0.030	+0.028	<.001	<.001	3	14
STAD	Positive regulation of Wnt signaling pathway →	+0.041	+0.028	<.001	<.001	3	14
ESCA	Negative regulation of neuron projection development →	+0.047	+0.031	<.001	.006	3	14
STAD	Negative regulation of cell projection organization →	+0.033	+0.030	<.001	<.001	3	14
STAD	Protein-containing complex disassembly →	+0.045	+0.028	<.001	<.001	3	14
STAD	Regulation of actin filament organization →	+0.051	+0.032	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,332 associations by consensus.

Sex differentiation by LINC01544 expression — STAD

Explore this box plot interactively →