LINC01523

Across TCGA patient cohorts, LINC01523 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,449 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01523-associated GO terms across cancer lineages are Protein localization to cytoskeleton, Cell cycle G1/S phase transition, and Interstrand cross-link repair. Each is linked with LINC01523 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC01523-to-partner and partner-to-LINC01523 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein localization to cytoskeleton grouped by LINC01523-low versus LINC01523-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01523→partner) and Y-score (partner→LINC01523) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Protein localization to cytoskeleton →	+0.049	+0.112	<.001	<.001	3	12
UCEC	Cell cycle G1/S phase transition →	+0.044	+0.087	<.001	<.001	3	12
STAD	Interstrand cross-link repair →	+0.047	+0.168	<.001	<.001	3	12
STAD	Microtubule polymerization or depolymerization →	+0.043	+0.098	<.001	<.001	3	11
STAD	Peptidyl-threonine modification →	+0.050	+0.162	<.001	<.001	3	11
STAD	Regulation of microtubule-based process →	+0.044	+0.186	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,449 associations by consensus.

Protein localization to cytoskeleton by LINC01523 expression — STAD

Explore this box plot interactively →