LINC01515

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC01515 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of LINC01515’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal papillary cell carcinoma (KIRP), where LINC01515 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LINC01515 is over-expressed in tumor, although a few such as KICH and UCEC show the opposite, repressed pattern.

KIRP, KICH, and LUAD are the cancer types where LINC01515 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC01515 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRPAllII,III,IV+0.421.00110view →
KICHFemaleII,III,IV−0.772<.0019view →
LUADMaleII,III,IV+0.683<.0018view →
KIRCMaleAll+0.291<.0018view →
LIHCMaleAll+0.263<.0016view →
CHOLAllAll+0.868<.0015view →
UCECAllAll−0.353.0184view →
LUSCAllAll+0.284<.0013view →
BRCAFemaleAll−0.184.0183view →
THCAAllAll−0.176.0023view →
PRADAllAll−0.244<.0012view →
READAllII,III,IV+0.392.0371view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

Exploration