LINC01499

Across TCGA patient cohorts, LINC01499 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,138 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01499-associated GO terms across cancer lineages are Regulation of organelle assembly, Regulation of DNA biosynthetic process, and Protein stabilization. Each is linked with LINC01499 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01499-to-partner and partner-to-LINC01499 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of organelle assembly grouped by LINC01499-low versus LINC01499-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01499→partner) and Y-score (partner→LINC01499) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of organelle assembly →	+0.078	+0.105	<.001	<.001	3	10
STAD	Regulation of DNA biosynthetic process →	+0.086	+0.100	<.001	<.001	3	10
STAD	Protein stabilization →	+0.083	+0.098	<.001	<.001	3	10
ESCA	RNA 3'-end processing →	+0.093	+0.133	<.001	<.001	3	10
ESCA	Regulation of intrinsic apoptotic signaling pathway →	+0.098	+0.124	<.001	.001	3	9
STAD	Alpha-amino acid metabolic process →	+0.050	+0.118	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,138 associations by consensus.

Regulation of organelle assembly by LINC01499 expression — STAD

Explore this box plot interactively →