LINC01480

Across TCGA patient cohorts, LINC01480 RNA expression is significantly associated with the protein abundance of many other proteins, with 20,452 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01480-associated proteins across cancer lineages are ARHGEF6, HCLS1, and VIM. Each is linked with LINC01480 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01480-to-partner and partner-to-LINC01480 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01480 versus ARHGEF6 in LSCC, with a Pearson correlation of 0.76.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01480→partner) and Y-score (partner→LINC01480) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	ARHGEF6 →	+0.505	+0.918	<.001	<.001	3	9
GBM	HCLS1 →	+0.647	+1.005	<.001	<.001	3	9
PDAC	VIM →	+0.463	+0.587	<.001	<.001	3	8
LSCC	DOCK2 →	+0.614	+0.952	<.001	<.001	3	8
GBM	AIF1 →	+0.697	+1.062	<.001	<.001	3	8
OV	EVL →	+0.679	+0.820	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,452 associations by consensus.

LINC01480 vs ARHGEF6 — LSCC

Explore this scatter interactively →