LINC01479

Across TCGA patient cohorts, LINC01479 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,157 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC01479-associated proteins across cancer lineages are NFATC2, RAB10, and SH2D1A. Each is linked with LINC01479 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01479-to-partner and partner-to-LINC01479 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01479 versus NFATC2 in HNSC, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01479→partner) and Y-score (partner→LINC01479) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	NFATC2 →	+0.378	+0.799	.001	<.001	3	4
HNSC	RAB10 →	-0.347	-0.675	<.001	.002	3	4
LSCC	SH2D1A →	+0.612	+0.296	<.001	<.001	3	4
HNSC	APOL3 →	+0.562	+0.671	<.001	<.001	3	3
LSCC	MYO9B_S1354 →	+0.660	+0.286	<.001	.006	3	3
HNSC	NES →	+0.751	+0.567	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,157 associations by consensus.

LINC01479 vs NFATC2 — HNSC

Explore this scatter interactively →