LINC01477

Across TCGA patient cohorts, LINC01477 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,308 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01477-associated GO terms across cancer lineages are Ribose phosphate biosynthetic process, Monosaccharide metabolic process, and Nucleoside phosphate biosynthetic process. Each is linked with LINC01477 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01477-to-partner and partner-to-LINC01477 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribose phosphate biosynthetic process grouped by LINC01477-low versus LINC01477-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01477→partner) and Y-score (partner→LINC01477) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Ribose phosphate biosynthetic process →	+0.096	+0.077	<.001	.002	3	10
ESCA	Monosaccharide metabolic process →	+0.085	+0.082	<.001	.001	3	9
ESCA	Nucleoside phosphate biosynthetic process →	+0.091	+0.079	<.001	.002	3	9
ESCA	ATP metabolic process →	+0.106	+0.125	<.001	.001	3	9
ESCA	Regulation of reactive oxygen species metabolic process →	+0.088	+0.138	<.001	<.001	3	8
ESCA	Organelle fusion →	+0.094	+0.087	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,308 associations by consensus.

Ribose phosphate biosynthetic process by LINC01477 expression — ESCA

Explore this box plot interactively →