LINC01438

Across TCGA patient cohorts, LINC01438 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,809 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01438-associated GO terms across cancer lineages are Myoblast differentiation, Negative regulation of intracellular protein transport, and Receptor-mediated endocytosis. Each is linked with LINC01438 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC01438-to-partner and partner-to-LINC01438 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Myoblast differentiation grouped by LINC01438-low versus LINC01438-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01438→partner) and Y-score (partner→LINC01438) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Myoblast differentiation →	+0.105	+0.119	<.001	<.001	3	8
STAD	Negative regulation of intracellular protein transport →	+0.107	+0.071	<.001	<.001	3	7
STAD	Receptor-mediated endocytosis →	+0.090	+0.065	<.001	<.001	3	6
STAD	Phospholipid biosynthetic process →	+0.108	+0.063	<.001	<.001	3	6
UCEC	Canonical NF-kappaB signal transduction →	+0.121	+0.047	<.001	.002	3	6
STAD	Negative regulation of transferase activity →	+0.114	+0.069	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,809 associations by consensus.

Myoblast differentiation by LINC01438 expression — STAD

Explore this box plot interactively →