LINC01431

Across TCGA patient cohorts, LINC01431 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,708 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01431-associated proteins across cancer lineages are GFPT2, NARS2, and PSME3IP1. Each is linked with LINC01431 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01431-to-partner and partner-to-LINC01431 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01431 versus GFPT2 in GBM, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01431→partner) and Y-score (partner→LINC01431) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	GFPT2 →	-0.490	-0.292	.002	.001	3	4
LSCC	NARS2 →	+0.230	+0.360	.009	<.001	3	3
GBM	PSME3IP1 →	+0.298	+0.545	.001	<.001	3	3
BRCA	MSI2 →	+0.457	+0.420	.002	.002	3	3
GBM	PTPN12 →	-0.421	-0.450	<.001	<.001	3	3
PDAC	UBL4A_S90 →	+0.655	+0.259	.003	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,708 associations by consensus.

LINC01431 vs GFPT2 — GBM

Explore this scatter interactively →