LINC01424

Across TCGA patient cohorts, LINC01424 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,158 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01424-associated proteins across cancer lineages are ADNP, DEK, and GATAD2B. Each is linked with LINC01424 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC01424-to-partner and partner-to-LINC01424 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01424 versus ADNP in GBM, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01424→partner) and Y-score (partner→LINC01424) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ADNP →	+0.357	+0.505	.001	<.001	3	7
LSCC	DEK →	+0.318	+0.520	<.001	<.001	3	7
LSCC	GATAD2B →	+0.409	+0.713	<.001	<.001	3	7
LSCC	GTF3C4 →	+0.368	+0.493	<.001	<.001	3	7
HNSC	ZNF638 →	+0.264	+0.460	.001	.002	3	7
GBM	PNN →	+0.284	+0.489	.007	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,158 associations by consensus.

LINC01424 vs ADNP — GBM

Explore this scatter interactively →