LINC01419

Across TCGA patient cohorts, LINC01419 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,232 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC01419-associated GO terms across cancer lineages are Mitotic metaphase chromosome alignment, Metaphase chromosome alignment, and Attachment of spindle microtubules to kinetochore. Each is linked with LINC01419 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01419-to-partner and partner-to-LINC01419 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitotic metaphase chromosome alignment grouped by LINC01419-low versus LINC01419-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01419→partner) and Y-score (partner→LINC01419) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Mitotic metaphase chromosome alignment →	+0.064	+0.272	<.001	<.001	3	13
STAD	Metaphase chromosome alignment →	+0.061	+0.285	<.001	<.001	3	13
STAD	Attachment of spindle microtubules to kinetochore →	+0.103	+0.524	<.001	<.001	3	12
STAD	DNA replication initiation →	+0.063	+0.307	<.001	<.001	3	12
STAD	Regulation of mitotic cell cycle spindle assembly checkpoint →	+0.088	+0.514	<.001	<.001	3	12
STAD	Chromosome localization →	+0.089	+0.505	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,232 associations by consensus.

Mitotic metaphase chromosome alignment by LINC01419 expression — STAD

Explore this box plot interactively →