LINC01413

Across TCGA patient cohorts, LINC01413 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,621 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC01413-associated GO terms across cancer lineages are Positive regulation of DNA recombination, Mitochondrial respiratory chain complex assembly, and Intestinal cholesterol absorption. Each is linked with LINC01413 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01413-to-partner and partner-to-LINC01413 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA recombination grouped by LINC01413-low versus LINC01413-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01413→partner) and Y-score (partner→LINC01413) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Positive regulation of DNA recombination →	+0.024	+1.135	<.001	<.001	3	9
DLBC	Mitochondrial respiratory chain complex assembly →	+0.055	+0.303	.002	.001	3	9
ESCA	Intestinal cholesterol absorption →	-0.076	-0.149	.001	.004	3	8
KICH	Regulation of RNA splicing →	+0.029	+0.060	<.001	<.001	3	8
TGCT	Positive regulation of DNA repair →	+0.023	+0.958	<.001	<.001	3	8
KIRC	Negative regulation of mRNA processing →	+0.035	+0.037	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,621 associations by consensus.

Positive regulation of DNA recombination by LINC01413 expression — TGCT

Explore this box plot interactively →