LINC01411

Across TCGA patient cohorts, LINC01411 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,642 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01411-associated proteins across cancer lineages are MSX2_S91, RAD50, and EXOC1. Each is linked with LINC01411 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01411-to-partner and partner-to-LINC01411 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01411 versus MSX2_S91 in UCEC, with a Pearson correlation of 0.59.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01411→partner) and Y-score (partner→LINC01411) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	MSX2_S91 →	+1.159	+1.348	<.001	<.001	3	4
BRCA	RAD50 →	+0.291	+0.851	<.001	.001	3	3
BRCA	EXOC1 →	+0.194	+1.137	<.001	.002	3	3
BRCA	FARP1 →	+0.435	+1.244	<.001	<.001	3	3
GBM	GOT2 →	+0.469	+0.969	<.001	<.001	3	3
UCEC	GPX2 →	+1.615	+1.574	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,642 associations by consensus.

LINC01411 vs MSX2_S91 — UCEC

Explore this scatter interactively →