LINC01388

Across TCGA patient cohorts, LINC01388 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,763 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC01388-associated GO terms across cancer lineages are Phosphatidylinositol-3-phosphate biosynthetic process, Positive regulation of GTPase activity, and Calcium ion transmembrane import into cytosol. Each is linked with LINC01388 in more than 19 cancer types. Because this analysis shows association rather than direction, both LINC01388-to-partner and partner-to-LINC01388 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Phosphatidylinositol-3-phosphate biosynthetic process grouped by LINC01388-low versus LINC01388-high in DLBC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01388→partner) and Y-score (partner→LINC01388) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
DLBC	Phosphatidylinositol-3-phosphate biosynthetic process →	+0.092	+0.260	<.001	<.001	3	20
STAD	Positive regulation of GTPase activity →	+0.043	+0.217	<.001	<.001	3	19
ESCA	Calcium ion transmembrane import into cytosol →	+0.035	+0.314	<.001	<.001	3	18
DLBC	Post-Golgi vesicle-mediated transport →	+0.059	+0.241	.001	<.001	3	18
ESCA	Maintenance of location in cell →	+0.051	+0.249	<.001	<.001	3	18
ESCA	Endothelium development →	+0.058	+0.221	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,763 associations by consensus.

Phosphatidylinositol-3-phosphate biosynthetic process by LINC01388 expression — DLBC

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