LINC01349

Across TCGA patient cohorts, LINC01349 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,918 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01349-associated GO terms across cancer lineages are Regulation of leukocyte proliferation, Cellular response to type II interferon, and Regulation of alpha-beta T cell activation. Each is linked with LINC01349 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC01349-to-partner and partner-to-LINC01349 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of leukocyte proliferation grouped by LINC01349-low versus LINC01349-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01349→partner) and Y-score (partner→LINC01349) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of leukocyte proliferation →	+0.071	+0.066	<.001	<.001	3	14
STAD	Cellular response to type II interferon →	+0.079	+0.064	<.001	<.001	3	13
STAD	Regulation of alpha-beta T cell activation →	+0.061	+0.061	<.001	<.001	3	13
STAD	Positive regulation of B cell activation →	+0.077	+0.070	<.001	<.001	3	12
STAD	Antigen receptor-mediated signaling pathway →	+0.078	+0.060	<.001	<.001	3	12
STAD	Reactive oxygen species metabolic process →	+0.084	+0.070	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,918 associations by consensus.

Regulation of leukocyte proliferation by LINC01349 expression — STAD

Explore this box plot interactively →