LINC01343

Across TCGA patient cohorts, LINC01343 RNA expression is significantly associated with the RNA expression of many other genes, with 8,551 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible LINC01343-associated genes across cancer lineages are MIR3659HG, POU3F1, and KRT5. Each is linked with LINC01343 in more than 26 cancer types. Because this analysis shows association rather than direction, both LINC01343-to-partner and partner-to-LINC01343 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01343 versus MIR3659HG in THYM, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01343→partner) and Y-score (partner→LINC01343) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	MIR3659HG →	+1.604	+0.107	<.001	<.001	3	27
HNSC	POU3F1 →	+2.200	+1.014	<.001	<.001	3	23
ESCA	KRT5 →	+5.878	+0.260	<.001	<.001	3	12
ESCA	TENM2 →	+2.771	+0.251	<.001	<.001	3	12
ESCA	MN1 →	+1.260	+0.196	<.001	<.001	3	11
ESCA	EFNB1 →	+0.918	+0.268	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,551 associations by consensus.

LINC01343 vs MIR3659HG — THYM

Explore this scatter interactively →