LINC01340

Across TCGA patient cohorts, LINC01340 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,899 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01340-associated GO terms across cancer lineages are Golgi organization, Negative regulation of protein catabolic process, and Retrograde transport, endosome to Golgi. Each is linked with LINC01340 in more than 20 cancer types. Because this analysis shows association rather than direction, both LINC01340-to-partner and partner-to-LINC01340 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi organization grouped by LINC01340-low versus LINC01340-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01340→partner) and Y-score (partner→LINC01340) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Golgi organization →	+0.047	+0.091	<.001	<.001	3	21
ESCA	Negative regulation of protein catabolic process →	+0.043	+0.089	<.001	<.001	3	20
STAD	Retrograde transport, endosome to Golgi →	+0.065	+0.178	<.001	<.001	3	19
STAD	Translational initiation →	+0.050	+0.077	<.001	<.001	3	19
STAD	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.051	+0.101	<.001	<.001	3	19
ESCA	Protein desumoylation →	+0.053	+0.090	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,899 associations by consensus.

Golgi organization by LINC01340 expression — STAD

Explore this box plot interactively →