LINC01339

Across TCGA patient cohorts, LINC01339 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,685 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01339-associated GO terms across cancer lineages are Mitochondrial gene expression, Positive regulation of amide metabolic process, and Obsolete mRNA polyadenylation. Each is linked with LINC01339 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01339-to-partner and partner-to-LINC01339 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitochondrial gene expression grouped by LINC01339-low versus LINC01339-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01339→partner) and Y-score (partner→LINC01339) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Mitochondrial gene expression →	+0.115	+0.128	<.001	<.001	3	13
STAD	Positive regulation of amide metabolic process →	+0.093	+0.102	<.001	<.001	3	13
STAD	Obsolete mRNA polyadenylation →	+0.095	+0.093	<.001	<.001	3	12
STAD	tRNA metabolic process →	+0.100	+0.115	<.001	<.001	3	12
STAD	Peptidyl-lysine modification →	+0.089	+0.107	<.001	<.001	3	12
STAD	Positive regulation of post-translational protein modification →	+0.095	+0.102	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,685 associations by consensus.

Mitochondrial gene expression by LINC01339 expression — STAD

Explore this box plot interactively →