LINC01297

Across TCGA patient cohorts, LINC01297 RNA expression is significantly associated with the RNA expression of many other genes, with 7,715 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC01297-associated genes across cancer lineages are PSLNR, POTEH, and GRAMD4P3. Each is linked with LINC01297 in more than 25 cancer types. Because this analysis shows association rather than direction, both LINC01297-to-partner and partner-to-LINC01297 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01297 versus PSLNR in OV, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01297→partner) and Y-score (partner→LINC01297) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	PSLNR →	+1.694	+0.442	<.001	<.001	3	26
PRAD	POTEH →	+1.270	+1.710	<.001	<.001	3	23
PRAD	GRAMD4P3 →	+1.314	+2.107	<.001	<.001	3	20
THYM	NF1P8 →	+1.490	+0.285	.001	<.001	3	19
THYM	FAR2P4 →	+1.402	+0.226	.001	.007	3	18
PRAD	GRAMD4P2 →	+0.883	+1.350	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,715 associations by consensus.

LINC01297 vs PSLNR — OV

Explore this scatter interactively →