LINC01287

Across TCGA patient cohorts, LINC01287 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,893 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC01287-associated GO terms across cancer lineages are Regulation of proteasomal ubiquitin-dependent protein catabolic process, Positive regulation of double-strand break repair via homologous recombination, and Regulation of double-strand break repair. Each is linked with LINC01287 in more than 21 cancer types. Because this analysis shows association rather than direction, both LINC01287-to-partner and partner-to-LINC01287 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of proteasomal ubiquitin-dependent protein catabolic process grouped by LINC01287-low versus LINC01287-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01287→partner) and Y-score (partner→LINC01287) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of proteasomal ubiquitin-dependent protein catabolic process →	+0.094	+0.437	<.001	.001	3	22
STAD	Positive regulation of double-strand break repair via homologous recombination →	+0.082	+0.408	<.001	<.001	3	21
ESCA	Regulation of double-strand break repair →	+0.066	+0.873	.001	<.001	2	22
STAD	Regulation of proteasomal protein catabolic process →	+0.082	+0.319	<.001	.002	3	21
ESCA	tRNA metabolic process →	+0.076	+0.920	<.001	<.001	3	21
STAD	Peptidyl-lysine modification →	+0.082	+0.391	<.001	<.001	3	21

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,893 associations by consensus.

Regulation of proteasomal ubiquitin-dependent protein catabolic process by LINC01287 expression — STAD

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