LINC01242

Across TCGA patient cohorts, LINC01242 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,011 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01242-associated GO terms across cancer lineages are Mitochondrial gene expression, Microtubule cytoskeleton organization involved in mitosis, and Regulation of cyclin-dependent protein kinase activity. Each is linked with LINC01242 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01242-to-partner and partner-to-LINC01242 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitochondrial gene expression grouped by LINC01242-low versus LINC01242-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01242→partner) and Y-score (partner→LINC01242) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Mitochondrial gene expression →	+0.088	+0.128	<.001	<.001	3	9
STAD	Microtubule cytoskeleton organization involved in mitosis →	+0.087	+0.104	<.001	<.001	3	9
STAD	Regulation of cyclin-dependent protein kinase activity →	+0.070	+0.114	<.001	<.001	3	9
STAD	tRNA metabolic process →	+0.078	+0.114	<.001	<.001	3	9
STAD	Protein targeting to membrane →	+0.071	+0.097	<.001	<.001	3	9
STAD	Spindle organization →	+0.082	+0.111	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,011 associations by consensus.

Mitochondrial gene expression by LINC01242 expression — STAD

Explore this box plot interactively →