LINC01241

Across TCGA patient cohorts, LINC01241 RNA expression is significantly associated with the RNA expression of many other genes, with 4,335 significant associations in total. LIHC shows the largest number of these associations.

The most reproducible LINC01241-associated genes across cancer lineages are VENTXP7, VN1R7P, and RNU6-874P. Each is linked with LINC01241 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC01241-to-partner and partner-to-LINC01241 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01241 versus VENTXP7 in KIRP, with a Pearson correlation of 0.44.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01241→partner) and Y-score (partner→LINC01241) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	VENTXP7 →	+0.778	+0.065	<.001	<.001	3	12
STAD	VN1R7P →	+0.538	+0.081	<.001	<.001	3	11
COAD	RNU6-874P →	+0.605	+0.103	<.001	<.001	3	11
STAD	COX6B1P3 →	+0.507	+0.084	<.001	<.001	3	11
COAD	RNA5SP36 →	+0.596	+0.533	<.001	<.001	3	11
STAD	RNU7-197P →	+0.854	+0.108	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,335 associations by consensus.

LINC01241 vs VENTXP7 — KIRP

Explore this scatter interactively →