LINC01241

Across TCGA patient cohorts, LINC01241 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,166 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01241-associated GO terms across cancer lineages are Regulation of DNA repair, Regulation of DNA-templated transcription elongation, and Signal transduction in response to DNA damage. Each is linked with LINC01241 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01241-to-partner and partner-to-LINC01241 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA repair grouped by LINC01241-low versus LINC01241-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01241→partner) and Y-score (partner→LINC01241) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of DNA repair →	+0.067	+0.103	<.001	<.001	3	13
STAD	Regulation of DNA-templated transcription elongation →	+0.078	+0.107	<.001	<.001	3	12
STAD	Signal transduction in response to DNA damage →	+0.088	+0.164	<.001	<.001	3	12
STAD	Protein stabilization →	+0.076	+0.108	<.001	<.001	3	12
STAD	Negative regulation of DNA metabolic process →	+0.061	+0.095	<.001	<.001	3	12
STAD	Positive regulation of DNA metabolic process →	+0.070	+0.102	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,166 associations by consensus.

Regulation of DNA repair by LINC01241 expression — STAD

Explore this box plot interactively →