LINC01228

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01228 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,748 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01228-associated GO terms across cancer lineages are Establishment of planar polarity involved in neural tube closure, Appendage morphogenesis, and Embryonic appendage morphogenesis. Each is linked with LINC01228 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01228-to-partner and partner-to-LINC01228 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01228→partner) and Y-score (partner→LINC01228) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCAEstablishment of planar polarity involved in neural tube closure →+0.085+0.286<.001.001311
TGCTAppendage morphogenesis →+0.041+0.171<.001.003311
TGCTEmbryonic appendage morphogenesis →+0.036+0.192<.001<.001311
STADSkeletal system morphogenesis →+0.048+0.041<.001<.001311
STADBone development →+0.052+0.043<.001<.001310
STADHeart valve development →+0.050+0.057<.001.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,748 associations by consensus.

Exploration