LINC01187

Across TCGA patient cohorts, LINC01187 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,583 significant associations in total. PRAD shows the largest number of these associations.

The most reproducible LINC01187-associated GO terms across cancer lineages are B cell receptor signaling pathway, Viral gene expression, and Positive regulation of pattern recognition receptor signaling pathway. Each is linked with LINC01187 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC01187-to-partner and partner-to-LINC01187 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, B cell receptor signaling pathway grouped by LINC01187-low versus LINC01187-high in SKCM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01187→partner) and Y-score (partner→LINC01187) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	B cell receptor signaling pathway →	+0.044	+0.016	<.001	<.001	2	15
LAML	Viral gene expression →	+0.036	+0.226	.001	<.001	3	13
STAD	Positive regulation of pattern recognition receptor signaling pathway →	+0.048	+0.057	<.001	.005	1	15
SARC	Lipopolysaccharide-mediated signaling pathway →	+0.036	+0.026	<.001	<.001	3	12
LUSC	Regulation of myeloid cell differentiation →	+0.020	+0.167	<.001	.001	3	12
TGCT	Myeloid cell development →	+0.024	+0.027	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,583 associations by consensus.

B cell receptor signaling pathway by LINC01187 expression — SKCM

Explore this box plot interactively →