LINC01146

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01146 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,886 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01146-associated proteins across cancer lineages are WAS, RCSD1, and SASH3. Each is linked with LINC01146 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01146-to-partner and partner-to-LINC01146 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01146 versus WAS in GBM, with a Pearson correlation of 0.79.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01146→partner) and Y-score (partner→LINC01146) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMWAS →+0.729+0.816<.001<.00139
GBMRCSD1 →+0.666+0.835<.001<.00139
BRCASASH3 →+0.649+0.205<.001<.00139
UCECADA2 →+0.817+0.746<.001<.00139
GBMADAP2 →+0.609+0.778<.001<.00139
GBMCYRIB →+0.387+0.671<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,886 associations by consensus.

LINC01146 vs WAS — GBM

Per-sample scatter of LINC01146 vs WAS in GBM (Pearson r = 0.79).

Explore this scatter interactively →

Exploration